PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01236.1.p
Common NameLOC105957060, MIMGU_mgv1a008598mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 369aa    MW: 40812.7 Da    PI: 9.8622
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01236.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.84.4e-1668165186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..........rergferspkqCkekwenlnkrykkikegekkr..tsessstcpy 81 
                       +W++  v  L+ea++ +++  +r+klk+++W++v+k++             +  ++++qCk+k+e+++kry+ + + +     ++ + s++p+
  Migut.B01236.1.p  68 EWSEGAVSSLLEAYEAKWTLRNRAKLKGQDWDDVAKHVscrggdggggGNNKSAKTQTQCKNKIESMKKRYRSESAAAAAAadAAAAASSWPL 160
                       5********************************************999999999999****************99988877435778899*** PP

          trihelix  82 fdqle 86 
                       +++++
  Migut.B01236.1.p 161 YSRMD 165
                       ***97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.6E-1766165No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MERDHNHDHH NHKNQETPPQ PPPSLPPSYQ NPKEIIFTDQ SPRKHIITVA TNNNNTAAAT  60
NDRLKRDEWS EGAVSSLLEA YEAKWTLRNR AKLKGQDWDD VAKHVSCRGG DGGGGGNNKS  120
AKTQTQCKNK IESMKKRYRS ESAAAAAAAD AAAAASSWPL YSRMDLLLRG INNNGPPPVL  180
VVEPPPVEIP PPPSTAVAAV PLVAVEMGSV KQNSRGSDVG GGDRLAKGKG DGTNNGPKLT  240
NQEPEKNPII DDTDSSTPAI YTEREKPNKK VPIKSNKDYA KSNNKKRKRE DYNWEVGESI  300
RWFAEVMVRS EQARMETMRE IERMRIEAEA KRGEMELKRT EIIANTQLQI AKLFAKASVQ  360
DNNWKKPT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836432.10.0PREDICTED: trihelix transcription factor ASIL2
TrEMBLA0A022RD620.0A0A022RD62_ERYGU; Uncharacterized protein
STRINGGLYMA13G26550.17e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122511620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.13e-61sequence-specific DNA binding transcription factors